| WBID | Waterbody | Location | Counties | IR Category | Impairment(s) |
| IA 02-WFC-0110_0 | Bailey Creek | mouth (NE 1/4 S19 T93N R19W Franklin Co.) to confluence with unnamed tributary in S16 T94N R22W Cerro Gordo Co. | Cerro Gordo--Franklin | 5b | Cause Unknown |
| IA 02-WFC-0090-L_0 | Beeds Lake | Franklin County S20 T92N R20W 2 mi W 1 mi N of Hampton | Franklin | 4a | Cause Unknown--Pathogens--Siltation--Turbidity |
| IA 02-IOW-00860-L_0 | Big Wall Lake | Wright County S14 T90N R24W 8 mi WSW of Dows. | Wright | 4c | Flow alteration |
| IA 02-CED-0370_2 | Black Hawk Creek | from Hwy 58 (E 1/2 S27 T88N R14W Black Hawk Co.) to confluence with N. Fk. Black Hawk Cr. in S1 T87N R15W Grundy Co. | Black Hawk--Grundy | 5b | Cause Unknown |
| IA 04-UDM-01880-L_0 | Briggs Woods Lake | Hamilton County S17 T88N R25W near Webster City. | Hamilton | 5b | Noxious aquatic plants--Nutrients--Organic enrichment/Low DO |
| IA 04-EDM-0090_3 | Buffalo Creek | confluence with Little Buffalo Cr.(S4 T97N R27W Kossuth Co.) to confluence with Drainage Ditch 48 in S33 T98N R26W Winnebago Co. | Hancock--Kossuth--Winnebago | 5b | Other habitat alterations--Siltation |
| IA 04-EDM-0090_2 | Buffalo Creek | from confluence with Union Slough Outlet (S9 T97N R28W Kossuth Co.) to confluence with Little Buffalo Cr. in S4 T97N R27W Kossuth Co. | Kossuth | 5b | Other habitat alterations--Siltation |
| IA 02-CED-0490_1 | Burr Oak Creek | mouth (S12 T98N R16W Mitchell Co.) to Mitchell County Road T46 at W line S10 T98N R16W Mitchell Co. | Mitchell | 5b | Other habitat alterations |
| IA 04-UDM-0247_0 | Buttermilk Creek | mouth (T92N R26W Sec 33) to headwaters (T92N R26W Sec 34) Wright County | Wright | 5a | Organic enrichment/Low DO |
| IA 02-WIN-0050_0 | Calmus Creek | mouth (S34 T97N R20W Cerro Gordo Co.) to west line S30 T97N R20W Cerro Gordo Co. | Cerro Gordo | 5b | Cause Unknown |
| IA 02-CED-0110_2 | Cedar River | from Charles City Dam No. 2 (NW 1/4 NE 1/4 S12 T95N R16W Floyd Co.) to confluence with Rock Cr. in S24 T97N R17W Floyd Co.) | Floyd | 5a | Mercury--Pathogens |
| IA 02-CED-0110_3 | Cedar River | from Rock Cr. nr Orchard (S24 T97N R17W Floyd Co.) to Iowa / Minnesota state line (S8 T100N R18W Mitchell Co.) | Floyd--Mitchell | 5a | Mercury--Nutrients--Other habitat alterations--Pathogens--Siltation |
| IA 02-WIN-00450-L_0 | Clear Lake | Cerro Gordo County S13 T96N R22W at Clear Lake. | Cerro Gordo | 5a | Algal Grwth/Chlorophyll a--Noxious aquatic plants--Pathogens--Turbidity |
| IA 02-IOW-04095-L_0 | Crystal Lake | Hancock County S15 T97N R25W at Crystal Lake. | Hancock | 4a | Algal Grwth/Chlorophyll a--Noxious aquatic plants--Nutrients--Suspended solids--Turbidity |
| IA 02-IOW-0380_1 | East Branch Iowa River | mouth (S19 T93N R23W Wright Co.) to confluence with unnamed tributary in S16 T94N R23W Hancock Co. north of Goodell State Wildlife Management Area. | Hancock--Wright | 5b | Organic enrichment/Low DO |
| IA 04-EDM-0010_1 | East Fork Des Moines River | mouth (Humboldt Co.) to Hwy 169 at Devine Access in S26 T94N R29W Kossuth Co. | Humboldt--Kossuth | 5a | Pathogens--Unionized Ammonia |
| IA 02-IOW-0080_2 | Iowa River | from confluence with Drainage Ditch No. 3 (aka Wheeler Cr.) in NW 1/4 SE 1/4 S10 T91N R23W Wright Co. to the Hwy 69 bridge at the south edge of Belmond in S30 T93N R23W Wright Co. | Wright | 5a | Pathogens |
| IA 02-IOW-0070_3 | Iowa River | from confluence with South Fork Iowa R. (S25 T87N R20W Hardin Co.) to confluence with Pine Cr. in S8 T87N R19W Hardin Co. | Hardin | 5a | Pathogens |
| IA 04-UDM-02290-L_0 | Lake Cornelia | Wright County S16 T92N R24W at Cornelia. | Wright | 4a | Algal Grwth/Chlorophyll a--Noxious aquatic plants--Nutrients--Turbidity |
| IA 04-EDM-0100_0 | Little Buffalo Creek (aka North Buffalo Cr.) | mouth (S4 T97N R27W Kossuth Co.) to confluence with unnamed tributary in S5 T98N R26W Winnebago Co. | Kossuth--Winnebago | 4c | Other habitat alterations |
| IA 03-SSK-00360-L_0 | Little Wall Lake | Hamilton County S10 T86N R24W 1 mi. S of Jewell | Hamilton | 4a | Algal Grwth/Chlorophyll a--Noxious aquatic plants--Nutrients--pH--Suspended solids--Turbidity |
| IA 04-UDM-0315_2 | Lizard Creek | from west line S5 T91N R32W at east edge of Pocahontas (Pocahontas Co.) to headwaters in S20 T93N R33W Pocahontas Co. | Pocahontas--Webster | 4d | Unionized Ammonia |
| IA 04-UDM-0300_1 | Lizard Creek | mouth to confluence with unnamed tributary in N 1/2 S31 T90N R30W Webster Co. | Webster | 5b | Flow alteration--Other habitat alterations--Siltation |
| IA 03-SSK-0090_0 | Long Dick Creek | mouth (S18 T85N R23W Story Co.) to N. line of S34 T86N R23W Hamilton Co. | Hamilton--Story | 5b | Cause Unknown--Organic enrichment/Low DO--Other habitat alterations |
| IA 03-SSK-0091_0 | Long Dick Creek | N. line of S34 T86N R23W Hamilton Co to headwaters | Hamilton | 5b | Organic enrichment/Low DO--Unionized Ammonia |
| IA 02-IOW-0330-L_0 | Lower Pine Lake | Hardin County S4 T87N R19W 0.5 mi E of Eldora. | Hardin | 5a | Algal Grwth/Chlorophyll a--Nutrients--Pathogens--Turbidity |
| IA 02-SHL-0020_1 | Shell Rock River | from confluence with the Winnebago River (Floyd Co.) to confluence with Rose Cr. in NW 1/4 S8 T97N R18W Cerro Gordo Co. | Cerro Gordo--Floyd | 5a | Algal Grwth/Chlorophyll a--Pathogens |
| IA 02-SHL-00295-L_0 | Silver Lake | Worth County S14 T100N R22W 8 mi. N of Joice. | Worth | 4a | Algal Grwth/Chlorophyll a--Noxious aquatic plants--Nutrients--Organic enrichment/Low DO--pH--Suspended solids--Turbidity |
| IA 04-UDM-0170_0 | Skillet Creek | mouth (S16 T86N R27W Webster Co.) to confluence with unnamed tributary in NW 1/4 SE 1/4 S14 T86N R28W Webster Co. | Webster | 5b | Organic enrichment/Low DO--Unionized Ammonia |
| IA 03-SSK-0030_3 | South Skunk River | from the north line of S6 T85 R23W Story Co (approximately 1 mile NNE of Story City) to confluence with Drainage Ditch 71 in SE 1/4 S11 T86N R24W Hamilton Co. | Hamilton--Story | 5b | Cause Unknown |
| IA 02-CED-0505_1 | Unnamed Creek (aka Drainage Ditch 3) | mouth (SW 1/4 S1 T95N R16W Floyd Co.) to confluence with unnamed tributary in T95N R16W Sec 4 Floyd Co. | Floyd | 5a | Chlorine |
| IA 02-WFC-0150_0 | Unnamed Tributary to West Fork Cedar River | mouth to headwaters Franklin Co | Franklin | 4d | Unionized Ammonia |
| IA 02-WIN-00465-L_0 | Ventura Marsh | Cerro Gordo County S19 T96N R22W at Ventura. | Cerro Gordo--Hancock | 4c | Algal Grwth/Chlorophyll a--Exotic species--Suspended solids--Turbidity |
| IA 01-WPS-0030_5 | Wapsipinicon River | from town of McIntyre (S34 T100N R15W Mitchell Co.) to north line of S20 T100N R15W Mitchell Co. | Mitchell | 5b | Cause Unknown--Organic enrichment/Low DO--Siltation--Unionized Ammonia |
| IA 02-WIN-0020_2 | Winnebago River | from confluence with Pike Run (S25 T99N R24W Winnebago Co.) to the Iowa/Minnesota state line | Winnebago | 5b | Cause Unknown--Other habitat alterations |